/*---------------------------------------------------------------------------*\
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\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | www.openfoam.com
\\/ M anipulation |
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Copyright (C) 2017-2018 OpenCFD Ltd.
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// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
\page domainDecomposition Domain decomposition
\section secIntroduction Introduction
When running a simulation in parallel, the geometry must first be decomposed
(segmented) into individual geometries for each MPI process. These separate
geometries are \a connected together with special processor boundary patches.
The processor-specific \c constant/polyMesh/boundary files will contain this
type of entry:
\verbatim
procBoundary0to14
{
type processor;
inGroups 1(processor);
nFaces 131;
startFace 34983;
matchTolerance 0.0001;
transform unknown;
myProcNo 0;
neighbProcNo 14;
}
\endverbatim
The decomposePar utility is a commonly used method to decompose domains
and subsequently distribute the fields.
The reconstructPar and reconstructParMesh utilities
can be used to reconstruct a single domain from the processor sub-domains.
\section secDecomposeParDict The decomposeParDict
The \c decomposeParDict is required by decompose utilities and for any solvers
or utilities running in parallel. It is normally located in the simulation
\c system directory. The -decomposeParDict name command-line option
can be used to specify an alternate file.
The \a numberOfSubdomains entry is mandatory:
\verbatim
numberOfSubdomains ;
\endverbatim
The \a method entry is required for the decomposePar utility and specifies
the decomposition method type:
\verbatim
method ;
\endverbatim
The \a method entry is generally not required when running a simulation.
OpenFOAM offers a variety of decomposition methods and interfaces to external,
third-party decomposition routines. The types of decomposition methods
available will thus depend on your particular installation.
\table
Name | Class
none | #Foam::noDecomp
manual | #Foam::manualDecomp
simple | #Foam::simpleGeomDecomp
hierarchical | #Foam::hierarchGeomDecomp
kahip | #Foam::kahipDecomp
metis | #Foam::metisDecomp
scotch | #Foam::scotchDecomp
structured | #Foam::structuredDecomp
multiLevel | #Foam::multiLevelDecomp
\endtable
If a decomposition method requires any additional configuration controls,
these are specified either within in a generic \c coeffs dictionary that
or a method-specific version. For example,
\verbatim
method hierarchical;
coeffs
{
n (4 2 3);
}
// -----
method metis;
metisCoeffs
{
method k-way;
}
\endverbatim
For simplicity, the generic \c coeffs dictionary is generally preferrable.
However, for some specific decomposition methods
(eg, \ref subsecMultiLevel "multiLevel") only the
method-specific coefficients dictionary is permitted.
\subsection subsecRegions Multi-region
When running multi-region simulations, it may be desirable to use different
decomposition methods for one or more regions, or even to have fewer
processors allocated to a particular region.
If, for example, the multi-region simulation contains a large fluid region
and a very small solid region, it can be advantageous to decompose the solid
onto fewer processors.
The region-wise specification is contained in a \a regions subdictionary with
decomposeParDict. For example,
\verbatim
numberOfSubdomains 2048;
method metis;
regions
{
heater
{
numberOfSubdomains 2;
method hierarchical;
coeffs
{
n (2 1 1);
}
}
"*.solid"
{
numberOfSubdomains 16;
method scotch;
}
}
\endverbatim
\note
The top-level numberOfSubdomains remains mandatory, since this specifies the
number of domains for the entire simulation. The individual regions may use
the same number or fewer domains. The \a numberOfSubdomains entry within
a region specification is only needed if the value differs.
\subsection subsecMultiLevel Multi-level decomposition
The #Foam::multiLevelDecomp decomposition provides a general means of
successively decomposing with different methods. Each application of the
decomposition is termed a level. For example,
\verbatim
numberOfSubdomains 2048;
method multiLevel;
multiLevelCoeffs
{
nodes
{
numberOfSubdomains 128;
method hierarchical;
coeffs
{
n (16 4 2);
}
}
cpus
{
numberOfSubdomains 2;
method scotch;
}
cores
{
numberOfSubdomains 8;
method metis;
}
}
\endverbatim
For cases where the same method is applied at each level, this can also be
conveniently written in a much shorter form:
\verbatim
numberOfSubdomains 2048;
method multiLevel;
multiLevelCoeffs
{
method scotch
domains (128 2 8);
}
\endverbatim
When the specified \a domains is smaller than \a numberOfSubdomains
but can be resolved as an integral multiple, this integral multiple
is used as the first level. This can make it easier to manage when
changing the number of domains for the simulation.
For example,
\verbatim
numberOfSubdomains 1024;
method multiLevel;
multiLevelCoeffs
{
method scotch
domains (2 8); //< inferred as domains (64 2 8);
}
\endverbatim
\subsection subsecConstraints Constraints
\verbatim
constraints
{
// Keep owner and neighbour of baffles on same processor
// (ie, keep it detectable as a baffle).
// Baffles are two boundary face sharing the same points
baffles
{
type preserveBaffles;
enabled true;
}
// Keep owner and neighbour on same processor for faces in zones
faces
{
type preserveFaceZones;
zones (".*");
enabled true;
}
// Keep owner and neighbour on same processor for faces in patches
// (only makes sense for cyclic patches. Not suitable for e.g.
// cyclicAMI since these are not coupled on the patch level.
// Use singleProcessorFaceSets for those.
patches
{
type preservePatches;
patches (".*");
enabled true;
}
// Keep all of faceSet on a single processor. This puts all cells
// connected with a point, edge or face on the same processor.
// (just having face connected cells might not guarantee a balanced
// decomposition)
// The processor can be -1 (the decompositionMethod chooses the
// processor for a good load balance) or explicitly provided (upsets
// balance)
processors
{
type singleProcessorFaceSets;
sets ((f1 -1));
enabled true;
}
// Decompose cells such that all cell originating from single cell
// end up on same processor
refinement
{
type refinementHistory;
enabled true;
}
// Prevent decomposition splitting of the geometric regions
// Uses any topoSetFaceSource for selecting the constrained faces
geometric
{
type geometric;
grow false;
selection
{
box1
{
source box;
min (-10 -10 -10);
max (1 1 1);
}
ball1
{
source sphere;
origin (-2 -2 1);
radius 1;
}
arbitrary
{
source surface;
surfaceType triSurfaceMesh;
surfaceName blob.obj;
}
}
}
}
\endverbatim
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